Advanced Proteomics Analysis Platform

Accelerate your proteomics research with highly demanding bioinformatic tools, for functional network analysis to achieve reliable and outstanding scientific discoveries.

Proteomics research laboratory with mass spectrometry equipment
40+
Actual collaborators
50+
Institutions
1M+
Analytical Runs
70+
Issued publications

Comprehensive Analysis Services

End-to-end and cost-effective bioinformatics solutions for proteomics research, powered by cutting-edge algorithms and validated methodologies. Service is based on workflows for:

- MS-based peptide sequencing

- Protein identification

- Data-Dependent and Independent Acquisition (DDA and DIA)

- Quantitative proteomics: label-free and isotope-coded procedures (TMT, iTRAQ, SILAC, dimethyl)

- Phosphoproteomics: phosphosite-occupancy and phosphorylation changes

- Interactomics (Pull-down, thermal shift assay)

- Drug effects on cell lines, tissues and animal models

- Postranslational modifications

- Preclinical and clinical analysis of plasma and serum

- Proteotype peptides for targeted proteomics: design and MRM data-processing

Research-grade computational capabilities

Our platform is based on highly demanding software like MaxQuant/Perseus, supported by Python and R programming, running on structured servers. This enables researchers to focus on biochemical discoveries and their further validation.

Functional annotation and enrichment analysis (GO, KEGG)

Characterize protein sets with Gene Ontology and KEGG pathway annotations, identify overrepresented biological terms, and prioritize interpretable mechanisms from large-scale datasets.

Clustering analysis

Group proteins and samples by abundance trends to reveal co-regulated patterns, phenotype-associated signatures, and biologically meaningful substructures in proteomic profiles.

Network analysis

Build and interpret protein interaction networks to detect key hubs, functional modules, and connectivity changes that support robust biological hypothesis generation.

Ready to accelerate your proteomics research?

Use MZBoostLab computational proteomic workflows for outstanding results under a cost-effective strategy. Contact us to schedule a consultation with our scientific team.